My Bibliography

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Skalka A. Multiple units of transcription in phage lambda. Cold Spring Harb Symp Quant Biol. 1966;31:377-9. doi: 10.1101/sqb.1966.031.01.048. PubMed PMID: 5237196.

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Skalka A. Nucleotide distribution and functional orientation in the deoxyribonucleic acid of phage phi 80. J Virol. 1969 Feb;3(2):150-6. doi: 10.1128/JVI.3.2.150-156.1969. PubMed PMID: 5774137; PubMed Central PMCID: PMC375745.

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Skalka A. Regional and temporal control of genetic transcription in phage lambda. Proc Natl Acad Sci U S A. 1966 May;55(5):1190-5. doi: 10.1073/pnas.55.5.1190. PubMed PMID: 5225516; PubMed Central PMCID: PMC224298.

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Skalka A, Fowler AV, Hurwitz J. The effect of histones on the enzymatic synthesis of ribonucleic acid. J Biol Chem. 1966 Feb 10;241(3):588-96. PubMed PMID: 5325264.

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Skalka A, Butler B, Echols H. Genetic control of transcription during development of phage gamma. Proc Natl Acad Sci U S A. 1967 Aug;58(2):576-83. doi: 10.1073/pnas.58.2.576. PubMed PMID: 4860753; PubMed Central PMCID: PMC335674.

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Bear PD, Skalka A. The molecular origin of lambda prophage mRNA. Proc Natl Acad Sci U S A. 1969 Feb;62(2):385-8. doi: 10.1073/pnas.62.2.385. PubMed PMID: 4894327; PubMed Central PMCID: PMC277809.

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Skalka A. Annual Reports of research in progress. In: Carnegie Institute Year Books (Washington, DC) 64:529; 66:565; 66:650, 657, 660; 67:556; 1965, 1966, 1967. 1968.

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Smith MG, Skalka A. Some properties of DNA from phage-infected bacteria. J Gen Physiol. 1966 Jul;49(6):127-42. doi: 10.1085/jgp.49.6.127. PubMed PMID: 5338559; PubMed Central PMCID: PMC2195539.

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Skalka A, Burgi E, Hershey AD. Segmental distribution of nucleotides in the DNA of bacteriophage lambda. J Mol Biol. 1968 May 28;34(1):1-16. doi: 10.1016/0022-2836(68)90230-1. PubMed PMID: 4999721.

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Yamagishi H, Skalka A. Distribution of nucleotides in Escherichia coli DNA from lambda-transducing phages. J Mol Biol. 1971 Jun 14;58(2):417-30. doi: 10.1016/0022-2836(71)90360-3. PubMed PMID: 4933411.

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Skalka A, Poonian M, Bartl P. Concatemers in DNA replication: electron microscopic studies of partially denatured intracellular lambda DNA. J Mol Biol. 1972 Mar 14;64(3):541-50. doi: 10.1016/0022-2836(72)90081-2. PubMed PMID: 4553853.

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Skalka SA, Hanson P. Comparisons of the distribution of nucleotides and common sequences in deoxyribonucleic acid from selected bacteriophages. J Virol. 1972 Apr;9(4):583-93. doi: 10.1128/JVI.9.4.583-593.1972. PubMed PMID: 4553679; PubMed Central PMCID: PMC356342.

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Enquist LW, Skalka A. Replication of bacteriophage lambda DNA dependent on the function of host and viral genes. I. Interaction of red, gam and rec. J Mol Biol. 1973 Apr 5;75(2):185-212. doi: 10.1016/0022-2836(73)90016-8. PubMed PMID: 4580674.

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Skalka A, Bartl P. Identification of repeating units in DNA concatemers. Methods Enzymol. 1974;29:459-66. doi: 10.1016/0076-6879(74)29038-4. PubMed PMID: 4852346.

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Skalka A, Weissbach A, Bartl P. Genetic recombination: genetic, physical, and biochemical aspects. Science. 1974 Mar 22;183(4130):1218-9. doi: 10.1126/science.183.4130.1218. PubMed PMID: 17789228.

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Reuben R, Gefter M, Enquist L, Skalka A. New method for large-scale preparation of covalently closed lambda DNA molecules. J Virol. 1974 Nov;14(5):1104-7. doi: 10.1128/JVI.14.5.1104-1107.1974. PubMed PMID: 4610176; PubMed Central PMCID: PMC355626.

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Benzinger R, Enquist LW, Skalka A. Transfection of Escherichia coli spheroplasts. V. Activity of recBC nuclease in rec+ and rec minus spheroplasts measured with different forms of bacteriophage DNA. J Virol. 1975 Apr;15(4):861-71. doi: 10.1128/JVI.15.4.861-871.1975. PubMed PMID: 123277; PubMed Central PMCID: PMC354530.

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Dawson P, Skalka A. Bacteriophage lambda head morphogenesis: studies on the role of DNA. J Mol Biol. 1975 Apr 5;93(2):167-80. doi: 10.1016/0022-2836(75)90126-6. PubMed PMID: 1097706.

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Greenstein M, Skalka A. Replication of bacteriophage lambda DNA: in vivo studies of the interaction between the viral gamma protein and the host recBC DNAase. J Mol Biol. 1975 Oct 5;97(4):543-9. doi: 10.1016/s0022-2836(75)80058-1. PubMed PMID: 1102714.

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Skalka A, Shapiro L. In situ immunoassays for gene translation products in phage plaques and bacterial colonies. Gene. 1976;1(1):65-79. doi: 10.1016/0378-1119(76)90007-x. PubMed PMID: 829886.

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Dawson P, Hohn B, Hohn T, Skalka A. Functional empty capsid precursors produced by lambda mutant defective for late lambda DNA replication. J Virol. 1976 Feb;17(2):576-83. doi: 10.1128/JVI.17.2.576-583.1976. PubMed PMID: 1255849; PubMed Central PMCID: PMC515448.

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Ray U, Sakalka A. Lysogenization of Escherichia coli by bacteriophage Lambda: complementary activity of the host's DNA polymerase I and ligase and bacteriophage replication proteins Q and P. J Virol. 1976 May;18(2):511-7. doi: 10.1128/JVI.18.2.511-517.1976. PubMed PMID: 775126; PubMed Central PMCID: PMC515576.

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Sogo JM, Greenstein M, Skalka A. The circle mode of replication of bacteriophage lambda: the role of covalently closed templates and the formation of mixed catenated dimers. J Mol Biol. 1976 May 25;103(3):537-62. doi: 10.1016/0022-2836(76)90216-3. PubMed PMID: 781278.

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Skalka AM. DNA replication--bacteriophage lambda. Curr Top Microbiol Immunol. 1977;78:201-37. Review. PubMed PMID: 340149.

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Reuben RC, Skalka A. Identification of the site of interruption in relaxed circles producing during bacteriophage lambda DNA circle replication. J Virol. 1977 Feb;21(2):673-82. doi: 10.1128/JVI.21.2.673-682.1977. PubMed PMID: 833943; PubMed Central PMCID: PMC353870.

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McClements W, Skalka AM. Analysis of chicken ribosomal RNA genes and construction of lambda hybrids containing gene fragments. Science. 1977 Apr 8;196(4286):195-7. doi: 10.1126/science.557836. PubMed PMID: 557836.

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Folkmanis A, Maltzman W, Mellon P, Skalka A, Echols H. The essential role of the cro gene in lytic development by bacteriophage lambda. Virology. 1977 Sep;81(2):352-62. doi: 10.1016/0042-6822(77)90151-9. PubMed PMID: 898664.

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Skalka AM. Recombinant DNA research. Res Manage. 1978 Jan;21(1):9-13. doi: 10.1080/00345334.1978.11756451. PubMed PMID: 11662918.

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Szybalski W, Skalka A. Nobel prizes and restriction enzymes. Gene. 1978 Nov;4(3):181-2. doi: 10.1016/0378-1119(78)90016-1. PubMed PMID: 744485.

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Sawin VL, Skalka AM, Wray W. Simultaneous observation of quinacrine bands and silver grains on radiolabeled metaphase chromosomes. Histochemistry. 1978 Dec 28;59(1):1-8. doi: 10.1007/BF00506472. PubMed PMID: 570184.

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Anderson D, Shapiro L, Skalka AM. In situ immunoassays for translation products. Methods Enzymol. 1979;68:428-36. doi: 10.1016/0076-6879(79)68032-1. PubMed PMID: 161606.

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McClements W, Hanafusa H, Tilghman S, Skalka A. Structural studies on oncornavirus-related sequences in chicken genomic DNA: two-step analyses of EcoRI and Bgl I restriction digests and tentative mapping of a ubiquitous endogenous provirus digests and tentative mapping of a ubiquitous endogenous provirus. Proc Natl Acad Sci U S A. 1979 May;76(5):2165-9. doi: 10.1073/pnas.76.5.2165. PubMed PMID: 221917; PubMed Central PMCID: PMC383558.

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Nisen P, Medford R, Mansour J, Purucker M, Skalka A, Shapiro L. Cell-cycle-associated rearrangement of inverted repeat DNA sequences. Proc Natl Acad Sci U S A. 1979 Dec;76(12):6240-4. doi: 10.1073/pnas.76.12.6240. PubMed PMID: 293718; PubMed Central PMCID: PMC411839.

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Skalka A, DeBona P, Hishinuma F, McClements W. Avian endogenous proviral DNA: analysis of integrated ev 1 and a related gs- chf- provirus purified by molecular cloning. Cold Spring Harb Symp Quant Biol. 1980;44 Pt 2,:1097-104. doi: 10.1101/sqb.1980.044.01.118. PubMed PMID: 6253184.

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Boone LR, Skalka A. Two species of full-length cDNA are synthesized in high yield by melittin-treated avian retrovirus particles. Proc Natl Acad Sci U S A. 1980 Feb;77(2):847-51. doi: 10.1073/pnas.77.2.847. PubMed PMID: 6153806; PubMed Central PMCID: PMC348378.

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Ju G, Boone L, Skalka AM. Isolation and characterization of recombinant DNA clones of avian retroviruses: size heterogeneity and instability of the direct repeat. J Virol. 1980 Mar;33(3):1026-33. doi: 10.1128/JVI.33.3.1026-1033.1980. PubMed PMID: 6245258; PubMed Central PMCID: PMC288636.

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Ju G, Skalka AM. Nucleotide sequence analysis of the long terminal repeat (LTR) of avian retroviruses: structural similarities with transposable elements. Cell. 1980 Nov;22(2 Pt 2):379-86. doi: 10.1016/0092-8674(80)90348-7. PubMed PMID: 6256079.

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Baez M, Taussig R, Zazra JJ, Young JF, Palese P, Reisfeld A, Skalka AM. Complete nucleotide sequence of the influenza A/PR/8/34 virus NS gene and comparison with the NS genes of the A/Udorn/72 and A/FPV/Rostock/34 strains. Nucleic Acids Res. 1980 Dec 11;8(23):5845-58. doi: 10.1093/nar/8.23.5845. PubMed PMID: 7465426; PubMed Central PMCID: PMC324346.

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Hishinuma F, DeBona PJ, Astrin S, Skalka AM. Nucleotide sequence of acceptor site and termini of integrated avian endogenous provirus ev1: integration creates a 6 bp repeat of host DNA. Cell. 1981 Jan;23(1):155-64. doi: 10.1016/0092-8674(81)90280-4. PubMed PMID: 6260371.

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Skalka A, Ju G, Hishinuma F, DeBona PJ, Astrin S. Structural analogies among avian retroviral DNAs and transposable elements. Cold Spring Harb Symp Quant Biol. 1981;45 Pt 2:739-46. doi: 10.1101/sqb.1981.045.01.092. PubMed PMID: 6266766.

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Boone LR, Skalka AM. Viral DNA synthesized in vitro by avian retrovirus particles permeabilized with melittin. II. Evidence for a strand displacement mechanism in plus-strand synthesis. J Virol. 1981 Jan;37(1):117-26. doi: 10.1128/JVI.37.1.117-126.1981. PubMed PMID: 6260967; PubMed Central PMCID: PMC170988.

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Boone LR, Skalka AM. Viral DNA synthesized in vitro by avian retrovirus particles permeabilized with melittin. I. Kinetics of synthesis and size of minus- and plus-strand transcripts. J Virol. 1981 Jan;37(1):109-16. doi: 10.1128/JVI.37.1.109-116.1981. PubMed PMID: 6260966; PubMed Central PMCID: PMC170987.

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Kopchick JJ, Ju G, Skalka AM, Stacey DW. Biological activity of cloned retroviral DNA in microinjected cells. Proc Natl Acad Sci U S A. 1981 Jul;78(7):4383-7. doi: 10.1073/pnas.78.7.4383. PubMed PMID: 6270676; PubMed Central PMCID: PMC319794.

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Lerner TL, Skalka AM, Hanafusa H. Integration of Rous sarcoma virus DNA into chicken embryo fibroblasts: no preferred proviral acceptor site in the DNA of clones of singly infected transformed chicken cells. J Virol. 1981 Nov;40(2):421-30. doi: 10.1128/JVI.40.2.421-430.1981. PubMed PMID: 6275096; PubMed Central PMCID: PMC256643.

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Takeya T, Hanafusa H, Junghans RP, Ju G, Skalka AM. Comparison between the viral transforming gene (src) of recovered avian sarcoma virus and its cellular homolog. Mol Cell Biol. 1981 Nov;1(11):1024-37. doi: 10.1128/mcb.1.11.1024-1037.1981. PubMed PMID: 6287213; PubMed Central PMCID: PMC369724.

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Skalka AM, Boone L, Junghans R, Luk D. Genetic recombination in avian retroviruses. J Cell Biochem. 1982;19(3):293-304. doi: 10.1002/jcb.240190311. PubMed PMID: 7153254.

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Junghans RP, Boone LR, Skalka AM. Products of reverse transcription in avian retrovirus analyzed by electron microscopy. J Virol. 1982 Aug;43(2):544-54. doi: 10.1128/JVI.43.2.544-554.1982. PubMed PMID: 6180182; PubMed Central PMCID: PMC256158.

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Junghans RP, Boone LR, Skalka AM. Retroviral DNA H structures: displacement-assimilation model of recombination. Cell. 1982 Aug;30(1):53-62. doi: 10.1016/0092-8674(82)90011-3. PubMed PMID: 6181896.

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Ju G, Hishinuma F, Skalka AM. Nucleotide sequence analysis of avian retroviruses: structural similarities with transposable elements. Fed Proc. 1982 Aug;41(10):2659-61. PubMed PMID: 6286367.

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Neel BG, Gasic GP, Rogler CE, Skalka AM, Ju G, Hishinuma F, Papas T, Astrin SM, Hayward WS. Molecular analysis of the c-myc locus in normal tissue and in avian leukosis virus-induced lymphomas. J Virol. 1982 Oct;44(1):158-66. doi: 10.1128/JVI.44.1.158-166.1982. PubMed PMID: 6292482; PubMed Central PMCID: PMC256249.